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The gut-brain connection in Alzheimer’s unveiled with X-rays

by Medical Xpress
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Peter Cloetens, ESRF scientist, during the experiments at the European synchrotron ID16A beamline. The technique called nano- and micro X-ray phase-contrast tomography (XPCT), used at the ESRF, is a powerful tool to study structural and morphological alterations in the gut, without tissue manipulation. Credit: ESRF/Stef Candé.

Scientists led by the Institute of Nanotechnology in Italy, in collaboration with the ESRF, the European Synchrotron in Grenoble, France, have discovered how X-ray micro- and nano- tomography can provide clues on the processes that link the gut neurons with those in the brain and may trigger Alzheimer’s. The results are published in Science Advances.

Alzheimer’s disease, the most common type of dementia, is a neurodegenerative disorder characterized by brain alteration including synaptic loss, and neuronal cell death.

In recent years, scientists have found evidence that the gut and the brain communicate through the neurons placed in both organs. Dysfunction in this axis has been linked to psychiatric and neurological disorders, including Alzheimer’s.

The , which refers to the microorganisms in the intestinal tract, plays a key role in human health and influences brain function, cognition and behavior. “There are already many studies that support that changes in the gut composition can contribute to Alzheimer’s onset and progression,” explains Alessia Cedola, researcher from the Institute of Nanotechnology in Italy and corresponding author of the article.

In particular, dysbiosis, which is the process by which there is a loss of microbial diversity, induces the prevalence of dangerous bacteria producing toxic metabolites promoting inflammation, and, consequently, the breakage of the gut/brain barriers.

What happens exactly when gut dysbiosis occurs? “The main hypothesis is that changes trigger the escape of bad bacteria from the gut, entering the circulation, reaching the brain and triggering Alzheimer’s, but evidence is still poor,” adds Cedola.

The gut-brain connection in Alzheimer's unveiled with X-rays
Representative 3D rendering of the longitudinal view of one crypt of SAMR1 mouse. the epithelial layer of the crypt has been rendered in green. the Paneth cells are colored in yellow and the goblet cells in blue. Scale bars, 5 μm. Credit: Science Advances (2025). DOI: 10.1126/sciadv.adr8511

Getting to the core of gut health

Now scientists have discovered that nano- and micro X-ray phase-contrast tomography (XPCT) is a powerful tool to study structural and morphological alterations in the gut, without tissue manipulation. The team came to the ESRF, the European Synchrotron, in Grenoble, France, to scan samples on beamline ID16A.

“Thanks to this technique we can image soft biological tissues with excellent sensitivity in 3D, with minimal sample preparation and without ,” explains Peter Cloetens, scientist in charge of ID16A and co-author of the publication.

The data of the experiments, partially carried out also at Soleil, showed the changes in cell abundance and organization in the tissues, as well as structural alteration in different tissues of mice affected by Alzheimer’s.

Specifically, it showed relevant alterations in the villi and crypts of the gut, cellular transformations in Paneth and goblet cells, along with the detection of telocytes, neurons, erythrocytes, and mucus secretion by goblet cells within the gut cavity. All these elements, when working correctly, maintain gut health, support digestion, and protect the intestinal lining from damage.

“This technique represents a real breakthrough for the thorough analysis of the gut, and it could be pivotal in early detection and prognosis of the disease,” says Cedola.

Together with scientists Francesca Palermo and Claudia Balducci, the next steps in this research will be to further exploit the capabilities of XPCT to study how the gut communicates with the central nervous system. The team aims to investigate the enteric nervous system and its role in Alzheimer’s disease.

“By gaining a deeper understanding of these processes, we hope to identify new therapeutic targets and develop innovative treatments for this devastating disease. The ESRF will undoubtedly continue to play a crucial role in our research, and we look forward to many more exciting discoveries in the years to come,” concludes Cedola.

More information:
Francesca Palermo et al, Investigating Gut Alterations in Alzheimer’s Disease: In-depth Analysis with Micro and Nano 3D X-Ray Phase Contrast Tomography, Science Advances (2025). DOI: 10.1126/sciadv.adr8511. www.science.org/doi/10.1126/sciadv.adr8511

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The gut-brain connection in Alzheimer’s unveiled with X-rays (2025, February 3)
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